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heat shock protein Hsp20 of Anabaena variabilis str. ATCC 29413

 Names & Lineage - Classification - Sequence - Domains - Ontologies - Refernces - X-Ref - External Links -Record Info 

NAMES AND LINEAGE

Protein names

Name

heat shock protein Hsp20

Synonymous Names

Q3M3M7_ANAVT, HSP20

Taxon Information

Organism

Anabaena variabilis str. ATCC 29413

Organism ID

240292 [NCBI] [UNIPROT]

Lineage

Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena; Anabaena variabilis ATCC 29413

CLASSIFICATION

Protein Classification

Protein Family

Belongs to sHsp Protein family

SEQUENCE INFORMATION

Sequence
MAITRWEPFREIERLEPFREIDTLQRQINRLFDRLMPTNGGEKVGFAFVPAAELEEKDDAIHLKLEVPGL EANDIHVEATPESISITGERKSETKMEENGITRSEFRYGKFQRVIPLPSLIQNDKVQAEYKNGILRLTVP KAESERNKVVKVNIG

FASTA Format Composition Secondary Structure

Nucleotide
 ATGGCAATCACAAGATGGGAACCTTTCCGGGAAATTGAGCGCTTAGAACCATTTCGAGAAATTGATACATTACAACGGCAAATAAACCG
CTTGTTTGATAGGTTAATGCCAACCAATGGTGGTGAAAAAGTTGGTTTTGCCTTTGTACCTGCTGCTGAACTTGAAGAAAAGGATGATGC
TATTCATTTGAAACTAGAAGTCCCAGGCTTAGAAGCAAATGATATTCATGTAGAAGCGACTCCCGAATCGATTTCGATTACTGGTGAGCG
GAAGTCTGAGACTAAGATGGAAGAAAATGGCATTACTCGTTCTGAGTTTAGGTATGGTAAATTCCAACGAGTTATTCCCCTACCGTCTCT
AATTCAAAATGACAAAGTACAAGCTGAGTACAAGAACGGTATCCTCCGCCTCACTGTACCAAAAGCTGAGTCGGAAAGAAATAAAGTGGT
GAAAGTCAATATTGGTTAA 

Download Fasta Sequence

Composition
NucleotideCountPercentage
Adenine15534 %
Guanine10623 %
Thyamine12327 %
Cytosine8418 %
A+T27860 %
G+C19041 %

Total Bases :   468 bases

Microsatellites
SequencePosition LengthRepeats
CTGCTGCTG14833

Microsatellite Map

ATGGCAATCACAAGATGGGAACCTTTCCGGGAAATTGAGCGCTTAGAACCATTTCGAGAAATTGATACATTACAACGGCAAATAAACCGC
TTGTTTGATAGGTTAATGCCAACCAATGGTGGTGAAAAAGTTGGTTTTGCCTTTGTACCTGCTGCTGAACTTGAAGAAAAGGATGATGCT
ATTCATTTGAAACTAGAAGTCCCAGGCTTAGAAGCAAATGATATTCATGTAGAAGCGACTCCCGAATCGATTTCGATTACTGGTGAGCGG
AAGTCTGAGACTAAGATGGAAGAAAATGGCATTACTCGTTCTGAGTTTAGGTATGGTAAATTCCAACGAGTTATTCCCCTACCGTCTCTA
ATTCAAAATGACAAAGTACAAGCTGAGTACAAGAACGGTATCCTCCGCCTCACTGTACCAAAAGCTGAGTCGGAAAGAAATAAAGTGGTG
AAAGTCAATATTGGTTAA

Gene Information
Molecule Type genomic DNA
Bases 468 Bases
Molecular Weight145089.57 Da
Coding Sequence CP000117.1:6046676..6047143
NCBI ReferenceABA24409
Notes

DOMAINS AND MOTIFS   Hide

Domains
Domain Position Length Description Feature Identifier
sHsp 53 to 155 102 Alpha-crystallin domain PF00011

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Protein Card Information

Record Information

Entry Name

sHsp_ANVA1

Accession Number

sHsp_0024

Added on

2012-02-02

Updated On

2014-01-20