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heat shock protein, Hsp20 of Acidothermus cellulolyticus str. 11B

 Names & Lineage - Classification - Sequence - Domains - Ontologies - Refernces - X-Ref - External Links -Record Info 

NAMES AND LINEAGE

Protein names

Name

heat shock protein, Hsp20

Synonymous Names

A0LSH2_ACIC1, HSP20

Taxon Information

Organism

Acidothermus cellulolyticus str. 11B

Organism ID

351607 [NCBI] [UNIPROT]

Lineage

Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Frankineae; Acidothermaceae; Acidothermus; Acidothermus cellulolyticus 11B

CLASSIFICATION

Protein Classification

Protein Family

Belongs to sHsp Protein family

SEQUENCE INFORMATION

Sequence
MALRFDPFREFDRLTEQLLGSALGSVRTPRFMPMDLYRAGDHYVLHADLPGVDPGSVNVSVENGILTIEA ERTPRTDENLQWLASERFTGKFMRQISLGEGVDTDHIAATYENGVLTVTIPVAEKAKARRIEVTRADSPR VIESSAASVQQPASVS

FASTA Format Composition Secondary Structure

Nucleotide
 ATGGCGCTGCGCTTTGATCCGTTCCGTGAATTTGACCGGCTGACCGAACAACTCCTGGGGTCTGCTCTGGGGTCCGTCCGTACCCCGAG
GTTCATGCCGATGGATCTCTACCGCGCGGGTGACCACTACGTGCTGCACGCTGACCTACCGGGCGTCGATCCCGGGTCCGTGAATGTCAG
CGTCGAGAACGGCATCCTGACGATCGAGGCTGAACGCACGCCGCGGACCGACGAGAATCTCCAGTGGCTGGCGAGTGAGCGGTTCACCGG
AAAGTTCATGCGCCAGATCTCGCTCGGCGAGGGTGTGGACACCGACCACATCGCCGCCACCTACGAGAACGGCGTGCTGACGGTCACGAT
CCCGGTCGCCGAGAAGGCGAAGGCTCGCCGGATCGAAGTGACCAGAGCCGACAGCCCGCGCGTGATCGAGAGTTCCGCCGCGTCGGTGCA
GCAACCCGCGAGCGTCAGCTGA 

Download Fasta Sequence

Composition
NucleotideCountPercentage
Adenine8719 %
Guanine15433 %
Thyamine7917 %
Cytosine15133 %
A+T16636 %
G+C30565 %

Total Bases :   471 bases

Microsatellites
SequencePosition LengthRepeats
CGCGCG11123
CGCGCG41523

Microsatellite Map

ATGGCGCTGCGCTTTGATCCGTTCCGTGAATTTGACCGGCTGACCGAACAACTCCTGGGGTCTGCTCTGGGGTCCGTCCGTACCCCGAGG
TTCATGCCGATGGATCTCTACCGCGCGGGTGACCACTACGTGCTGCACGCTGACCTACCGGGCGTCGATCCCGGGTCCGTGAATGTCAGC
GTCGAGAACGGCATCCTGACGATCGAGGCTGAACGCACGCCGCGGACCGACGAGAATCTCCAGTGGCTGGCGAGTGAGCGGTTCACCGGA
AAGTTCATGCGCCAGATCTCGCTCGGCGAGGGTGTGGACACCGACCACATCGCCGCCACCTACGAGAACGGCGTGCTGACGGTCACGATC
CCGGTCGCCGAGAAGGCGAAGGCTCGCCGGATCGAAGTGACCAGAGCCGACAGCCCGCGCGTGATCGAGAGTTCCGCCGCGTCGGTGCAG
CAACCCGCGAGCGTCAGCTGA

Gene Information
Molecule Type genomic DNA
Bases 471 Bases
Molecular Weight145583.63 Da
Coding Sequence complement(CP000481.1:646838..647308)
NCBI ReferenceABK52382
NotesPFAM: heat shock protein Hsp20; KEGG: nfa:nfa8400

DOMAINS AND MOTIFS   Hide

Domains
Domain Position Length Description Feature Identifier
sHsp 35 to 144 99 Alpha-crystallin domain PF00011

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Protein Card Information

Record Information

Entry Name

sHsp_ACCE2

Accession Number

sHsp_0015

Added on

2012-02-02

Updated On

2014-01-20