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heat shock protein, Hsp20 of Acidothermus cellulolyticus str. 11B

 Names & Lineage - Classification - Sequence - Domains - Ontologies - Refernces - X-Ref - External Links -Record Info 

NAMES AND LINEAGE

Protein names

Name

heat shock protein, Hsp20

Synonymous Names

A0LR75_ACIC1, HSP20

Taxon Information

Organism

Acidothermus cellulolyticus str. 11B

Organism ID

351607 [NCBI] [UNIPROT]

Lineage

Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Frankineae; Acidothermaceae; Acidothermus; Acidothermus cellulolyticus 11B

CLASSIFICATION

Protein Classification

Protein Family

Belongs to sHsp Protein family

SEQUENCE INFORMATION

Sequence
MAVLVDPIRILDVLARDVRNLVGDGRAEWWMPIDLYREGDHYVVGVDLPGVDPGSIDVRVSADTLSIQAE RHAPSTDGGAWLIGERPYGRFRRQITLPDGVDADRVSAGYHDGVLTVRLPLTDAAKPRRIAVREAEERHA LDVAEAA

FASTA Format Composition Secondary Structure

Nucleotide
 ATGGCGGTGCTTGTTGACCCGATCCGCATTCTCGACGTCCTCGCCCGAGACGTCAGGAATCTTGTTGGCGACGGTCGGGCCGAGTGGTG
GATGCCGATCGACCTGTACCGCGAAGGTGATCACTACGTCGTCGGCGTCGACCTTCCGGGCGTTGATCCCGGTTCGATCGATGTCCGGGT
CAGCGCCGACACCCTCAGCATCCAAGCCGAGCGCCACGCGCCGTCCACTGATGGTGGAGCGTGGCTGATCGGCGAGCGACCGTACGGACG
GTTCCGCCGGCAGATCACCCTTCCGGACGGCGTGGACGCCGACCGCGTCTCCGCCGGCTACCACGACGGCGTCCTCACAGTCCGGCTCCC
GCTGACGGACGCCGCGAAGCCTCGGCGCATCGCGGTCCGCGAGGCCGAGGAGCGCCACGCGCTGGACGTTGCGGAGGCAGCGTGA 

Download Fasta Sequence

Composition
NucleotideCountPercentage
Adenine6615 %
Guanine15235 %
Thyamine7317 %
Cytosine15335 %
A+T13932 %
G+C30569 %

Total Bases :   444 bases

Microsatellites
SequencePosition LengthRepeats

Microsatellite Map

ATGGCGGTGCTTGTTGACCCGATCCGCATTCTCGACGTCCTCGCCCGAGACGTCAGGAATCTTGTTGGCGACGGTCGGGCCGAGTGGTGG
ATGCCGATCGACCTGTACCGCGAAGGTGATCACTACGTCGTCGGCGTCGACCTTCCGGGCGTTGATCCCGGTTCGATCGATGTCCGGGTC
AGCGCCGACACCCTCAGCATCCAAGCCGAGCGCCACGCGCCGTCCACTGATGGTGGAGCGTGGCTGATCGGCGAGCGACCGTACGGACGG
TTCCGCCGGCAGATCACCCTTCCGGACGGCGTGGACGCCGACCGCGTCTCCGCCGGCTACCACGACGGCGTCCTCACAGTCCGGCTCCCG
CTGACGGACGCCGCGAAGCCTCGGCGCATCGCGGTCCGCGAGGCCGAGGAGCGCCACGCGCTGGACGTTGCGGAGGCAGCGTGA

Gene Information
Molecule Type genomic DNA
Bases 444 Bases
Molecular Weight137100.96 Da
Coding Sequence CP000481.1:167683..168126
NCBI ReferenceABK51935
NotesPFAM: heat shock protein Hsp20; KEGG: nfa:nfa8400

DOMAINS AND MOTIFS   Hide

Domains
Domain Position Length Description Feature Identifier
sHsp 34 to 133 99 Alpha-crystallin domain PF00011

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Protein Card Information

Record Information

Entry Name

sHsp_ACCE1

Accession Number

sHsp_0014

Added on

2012-02-02

Updated On

2014-01-20