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heat shock protein Hsp20 of Acidithiobacillus ferrooxidans str. ATCC 53993

 Names & Lineage - Classification - Sequence - Domains - Ontologies - Refernces - X-Ref - External Links -Record Info 

NAMES AND LINEAGE

Protein names

Name

heat shock protein Hsp20

Synonymous Names

B5EKD0_ACIF5, HSP20

Taxon Information

Organism

Acidithiobacillus ferrooxidans str. ATCC 53993

Organism ID

380394 [NCBI] [UNIPROT]

Lineage

Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus; Acidithiobacillus ferrooxidans ATCC 53993

CLASSIFICATION

Protein Classification

Protein Family

Belongs to sHsp Protein family

SEQUENCE INFORMATION

Sequence
MALMKWEPLREIDDMFDRYVMSMGWPSRRQELITAGDWSPRVDISETDNEFLIKAEIPEVKKEDVKVSVD KGVLTIQGERKQEKEEKGKKFHRIERYYGSFIRSFTLPDNVDESNIKATFKDGMLNLQVPKSARAKHNAI EVKVE

FASTA Format Composition Secondary Structure

Nucleotide
 ATGGCACTTATGAAATGGGAACCACTGCGTGAAATAGACGACATGTTCGACCGCTATGTAATGTCGATGGGTTGGCCTTCCCGGCGTCA
GGAACTCATAACAGCGGGTGATTGGTCGCCCCGCGTTGATATCAGCGAGACTGATAACGAGTTCCTGATCAAGGCCGAAATACCTGAGGT
CAAGAAAGAAGATGTCAAAGTCAGTGTGGATAAAGGGGTGCTTACCATCCAGGGGGAACGGAAGCAGGAGAAGGAGGAGAAAGGGAAAAA
ATTTCATAGAATCGAGCGATACTACGGAAGTTTCATCCGTAGCTTTACGCTGCCAGATAATGTTGACGAATCCAACATAAAAGCCACGTT
CAAGGATGGTATGCTGAATCTTCAGGTGCCCAAAAGTGCTCGGGCGAAGCATAATGCCATTGAAGTGAAAGTGGAGTAA 

Download Fasta Sequence

Composition
NucleotideCountPercentage
Adenine13732 %
Guanine12529 %
Thyamine9222 %
Cytosine8420 %
A+T22953 %
G+C20948 %

Total Bases :   438 bases

Microsatellites
SequencePosition LengthRepeats
AAAAAA26423

Microsatellite Map

ATGGCACTTATGAAATGGGAACCACTGCGTGAAATAGACGACATGTTCGACCGCTATGTAATGTCGATGGGTTGGCCTTCCCGGCGTCAG
GAACTCATAACAGCGGGTGATTGGTCGCCCCGCGTTGATATCAGCGAGACTGATAACGAGTTCCTGATCAAGGCCGAAATACCTGAGGTC
AAGAAAGAAGATGTCAAAGTCAGTGTGGATAAAGGGGTGCTTACCATCCAGGGGGAACGGAAGCAGGAGAAGGAGGAGAAAGGGAAAAAA
TTTCATAGAATCGAGCGATACTACGGAAGTTTCATCCGTAGCTTTACGCTGCCAGATAATGTTGACGAATCCAACATAAAAGCCACGTTC
AAGGATGGTATGCTGAATCTTCAGGTGCCCAAAAGTGCTCGGGCGAAGCATAATGCCATTGAAGTGAAAGTGGAGTAA

Gene Information
Molecule Type genomic DNA
Bases 438 Bases
Molecular Weight136276.58 Da
Coding Sequence complement(CP001132.1:1720007..1720444)
NCBI ReferenceACH83965
NotesPFAM: heat shock protein Hsp20; KEGG: dps:DP1866

DOMAINS AND MOTIFS   Hide

Domains
Domain Position Length Description Feature Identifier
sHsp 43 to 145 102 Alpha-crystallin domain PF00011

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Protein Card Information

Record Information

Entry Name

sHsp_ACFE1

Accession Number

sHsp_0009

Added on

2012-02-02

Updated On

2014-01-20