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heat shock protein Hsp20 of Acidiphilium cryptum str. JF-5

 Names & Lineage - Classification - Sequence - Domains - Ontologies - Refernces - X-Ref - External Links -Record Info 

NAMES AND LINEAGE

Protein names

Name

heat shock protein Hsp20

Synonymous Names

A5FVK1_ACICJ, HSP20

Taxon Information

Organism

Acidiphilium cryptum str. JF-5

Organism ID

349163 [NCBI] [UNIPROT]

Lineage

Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; Acidiphilium cryptum JF-5

CLASSIFICATION

Protein Classification

Protein Family

Belongs to sHsp Protein family

SEQUENCE INFORMATION

Sequence
MTTRVFTSPLFLGFDHLEQVIERAAKTSSEGYPPYNIEQLSSTSLRITIAVAGFTMDDLQITQEDNQLVI RGRQNDDMQGRIFLHRGIAARQFQRAFVLAEGIEVKGAWLDNGLLHIDLARPLPEAKIRTIAIKKGAGGQ NGASSARTLDSDAVASRIVGRELQEGS

FASTA Format Composition Secondary Structure

Nucleotide
 TTGACAACTCGCGTTTTTACTTCGCCCTTGTTTCTGGGCTTTGATCATCTTGAACAGGTGATCGAACGTGCCGCCAAGACGTCGTCGGA
AGGGTATCCGCCCTACAACATCGAGCAACTCAGCTCGACAAGCCTGCGGATCACCATCGCCGTTGCCGGTTTCACGATGGACGATCTCCA
GATCACGCAGGAAGACAACCAGCTGGTGATCCGGGGCCGCCAGAACGACGACATGCAGGGGCGTATCTTCCTGCATCGCGGAATAGCCGC
GCGTCAGTTCCAGCGGGCTTTCGTTCTCGCGGAAGGTATCGAGGTCAAGGGCGCCTGGCTCGATAACGGGCTCCTGCATATCGACCTCGC
CCGGCCATTGCCGGAAGCGAAGATCCGCACGATCGCCATCAAGAAGGGAGCAGGCGGCCAAAACGGCGCCAGCTCAGCACGCACGCTCGA
CAGTGATGCAGTTGCGTCGCGCATCGTTGGGCGTGAACTTCAGGAGGGTTCCTGA 

Download Fasta Sequence

Composition
NucleotideCountPercentage
Adenine10622 %
Guanine14930 %
Thyamine9820 %
Cytosine15130 %
A+T20441 %
G+C30060 %

Total Bases :   504 bases

Microsatellites
SequencePosition LengthRepeats
CGCGCG26623

Microsatellite Map

TTGACAACTCGCGTTTTTACTTCGCCCTTGTTTCTGGGCTTTGATCATCTTGAACAGGTGATCGAACGTGCCGCCAAGACGTCGTCGGAA
GGGTATCCGCCCTACAACATCGAGCAACTCAGCTCGACAAGCCTGCGGATCACCATCGCCGTTGCCGGTTTCACGATGGACGATCTCCAG
ATCACGCAGGAAGACAACCAGCTGGTGATCCGGGGCCGCCAGAACGACGACATGCAGGGGCGTATCTTCCTGCATCGCGGAATAGCCGCG
CGTCAGTTCCAGCGGGCTTTCGTTCTCGCGGAAGGTATCGAGGTCAAGGGCGCCTGGCTCGATAACGGGCTCCTGCATATCGACCTCGCC
CGGCCATTGCCGGAAGCGAAGATCCGCACGATCGCCATCAAGAAGGGAGCAGGCGGCCAAAACGGCGCCAGCTCAGCACGCACGCTCGAC
AGTGATGCAGTTGCGTCGCGCATCGTTGGGCGTGAACTTCAGGAGGGTTCCTGA

Gene Information
Molecule Type genomic DNA
Bases 504 Bases
Molecular Weight155668.37 Da
Coding Sequence complement(CP000697.1:464342..464845)
NCBI ReferenceABQ29633
NotesPFAM: heat shock protein Hsp20

DOMAINS AND MOTIFS   Hide

Domains
Domain Position Length Description Feature Identifier
sHsp 39 to 134 95 Alpha-crystallin domain PF00011

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Protein Card Information

Record Information

Entry Name

sHsp_ACCR2

Accession Number

sHsp_0007

Added on

2012-02-02

Updated On

2014-01-20