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Heat shock protein (HSP20) family protein of Acaryochloris marina str. MBIC 11017

 Names & Lineage - Classification - Sequence - Domains - Ontologies - Refernces - X-Ref - External Links -Record Info 

NAMES AND LINEAGE

Protein names

Name

Heat shock protein (HSP20) family protein

Synonymous Names

B0CCG0_ACAM1, HSP20

Taxon Information

Organism

Acaryochloris marina str. MBIC 11017

Organism ID

329726 [NCBI] [UNIPROT]

Lineage

Bacteria; Cyanobacteria; Acaryochloris marina MBIC11017

CLASSIFICATION

Protein Classification

Protein Family

Belongs to sHsp Protein family

SEQUENCE INFORMATION

Sequence
MALVHWQPFRELEEMQRDVNRLVDRLSMTRQSGVGFVPAVELEDTAAQYCLRLELPGLKPEDVNIEVTEN SVSISGERRSETHSEDQGVTRSEFHYGTFQRVIPLPGRINPQEVQADYQQGVLTVTLPKVEEEKHNVVKV QVNS

FASTA Format Composition Secondary Structure

Nucleotide
 ATGGCATTAGTTCACTGGCAACCCTTCCGCGAATTAGAAGAGATGCAGCGGGATGTGAATCGTCTCGTTGATCGTCTTTCAATGACTCG
CCAGTCTGGTGTTGGATTTGTTCCTGCGGTGGAATTAGAGGATACTGCTGCACAGTATTGCTTACGCTTAGAACTCCCGGGCCTGAAGCC
TGAAGATGTCAATATCGAAGTCACAGAAAATTCTGTATCTATTAGTGGTGAGCGTCGTTCCGAGACCCATAGTGAAGATCAGGGAGTGAC
TCGCAGCGAGTTTCACTACGGGACATTTCAACGGGTGATTCCGCTACCGGGGCGCATCAATCCTCAAGAGGTCCAGGCCGATTACCAGCA
AGGCGTGTTAACCGTTACCCTTCCCAAAGTGGAAGAAGAAAAACATAACGTCGTCAAAGTTCAGGTTAACTCGTAG 

Download Fasta Sequence

Composition
NucleotideCountPercentage
Adenine11326 %
Guanine11427 %
Thyamine10926 %
Cytosine9923 %
A+T22252 %
G+C21349 %

Total Bases :   435 bases

Microsatellites
SequencePosition LengthRepeats
GAAGAAGAA39033

Microsatellite Map

ATGGCATTAGTTCACTGGCAACCCTTCCGCGAATTAGAAGAGATGCAGCGGGATGTGAATCGTCTCGTTGATCGTCTTTCAATGACTCGC
CAGTCTGGTGTTGGATTTGTTCCTGCGGTGGAATTAGAGGATACTGCTGCACAGTATTGCTTACGCTTAGAACTCCCGGGCCTGAAGCCT
GAAGATGTCAATATCGAAGTCACAGAAAATTCTGTATCTATTAGTGGTGAGCGTCGTTCCGAGACCCATAGTGAAGATCAGGGAGTGACT
CGCAGCGAGTTTCACTACGGGACATTTCAACGGGTGATTCCGCTACCGGGGCGCATCAATCCTCAAGAGGTCCAGGCCGATTACCAGCAA
GGCGTGTTAACCGTTACCCTTCCCAAAGTGGAAGAAGAAAAACATAACGTCGTCAAAGTTCAGGTTAACTCGTAG

Gene Information
Molecule Type genomic DNA
Bases 435 Bases
Molecular Weight134647.33 Da
Coding Sequence complement(CP000828.1:3022842..3023276)
NCBI ReferenceABW27989
Notes

DOMAINS AND MOTIFS   Hide

Domains
Domain Position Length Description Feature Identifier
sHsp 41 to 143 102 Alpha-crystallin domain PF00011

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Protein Card Information

Record Information

Entry Name

sHsp_ACMA3

Accession Number

sHsp_0003

Added on

2012-02-02

Updated On

2014-01-20