Help  Custom Search
 
Heat shock protein (HSP20) family protein of Acaryochloris marina str. MBIC 11017

 Names & Lineage - Classification - Sequence - Domains - Ontologies - Refernces - X-Ref - External Links -Record Info 

NAMES AND LINEAGE

Protein names

Name

Heat shock protein (HSP20) family protein

Synonymous Names

A8ZNK2_ACAM1, HSP20

Taxon Information

Organism

Acaryochloris marina str. MBIC 11017

Organism ID

329726 [NCBI] [UNIPROT]

Lineage

Bacteria; Cyanobacteria; Acaryochloris marina MBIC11017

CLASSIFICATION

Protein Classification

Protein Family

Belongs to sHsp Protein family

SEQUENCE INFORMATION

Sequence
MMINYWNPIEEIDTVRRQLDHLFEDAIDTGKSSNYPSWAPAVELWDTGDALILKAFLPGVNADSLDIQAT RESISIAGERHPEDLQEGTKRLFSDINYGHFRRASKLPVAIQNTKVEASFEQGLLTLRLPKVEEEQNKVV KVNLLNKGETSQAALEASHNS

FASTA Format Composition Secondary Structure

Nucleotide
 ATGATGATTAATTACTGGAACCCAATTGAAGAAATTGATACCGTTCGCAGACAACTCGATCACCTTTTTGAGGATGCCATCGATACAGG
CAAATCTTCAAATTATCCGAGTTGGGCACCTGCCGTAGAGCTATGGGACACGGGTGATGCCCTGATTCTCAAAGCCTTTCTACCTGGAGT
TAATGCGGACAGCTTAGATATTCAAGCCACTCGTGAATCTATTTCTATCGCTGGAGAACGTCACCCTGAAGACCTGCAGGAAGGAACCAA
GCGGTTATTCTCTGACATCAATTATGGTCACTTTCGTCGAGCCAGCAAACTGCCTGTTGCTATTCAAAACACCAAAGTTGAGGCATCTTT
TGAGCAAGGTCTTCTTACCCTTAGGCTACCTAAAGTTGAAGAGGAGCAGAACAAAGTTGTCAAAGTCAACCTTCTAAACAAGGGGGAAAC
ATCACAGGCTGCACTAGAGGCTAGCCACAACTCCTAA 

Download Fasta Sequence

Composition
NucleotideCountPercentage
Adenine14530 %
Guanine10522 %
Thyamine12125 %
Cytosine11524 %
A+T26655 %
G+C22046 %

Total Bases :   486 bases

Microsatellites
SequencePosition LengthRepeats

Microsatellite Map

ATGATGATTAATTACTGGAACCCAATTGAAGAAATTGATACCGTTCGCAGACAACTCGATCACCTTTTTGAGGATGCCATCGATACAGGC
AAATCTTCAAATTATCCGAGTTGGGCACCTGCCGTAGAGCTATGGGACACGGGTGATGCCCTGATTCTCAAAGCCTTTCTACCTGGAGTT
AATGCGGACAGCTTAGATATTCAAGCCACTCGTGAATCTATTTCTATCGCTGGAGAACGTCACCCTGAAGACCTGCAGGAAGGAACCAAG
CGGTTATTCTCTGACATCAATTATGGTCACTTTCGTCGAGCCAGCAAACTGCCTGTTGCTATTCAAAACACCAAAGTTGAGGCATCTTTT
GAGCAAGGTCTTCTTACCCTTAGGCTACCTAAAGTTGAAGAGGAGCAGAACAAAGTTGTCAAAGTCAACCTTCTAAACAAGGGGGAAACA
TCACAGGCTGCACTAGAGGCTAGCCACAACTCCTAA

Gene Information
Molecule Type genomic DNA
Bases 486 Bases
Molecular Weight149984.44 Da
Coding Sequence complement(CP000841.1:82170..82655)
NCBI ReferenceABW32588
Notes

DOMAINS AND MOTIFS   Hide

Domains
Domain Position Length Description Feature Identifier
sHsp 43 to 144 102 Alpha-crystallin domain PF00011

Graphical View

ONTOLOGIES   Show


LITERATURE REFERENCES   Show


ACCESSIONS   Show


OTHER LINKS   Show



Protein Card Information

Record Information

Entry Name

sHsp_ACMA2

Accession Number

sHsp_0002

Added on

2012-02-02

Updated On

2014-01-20