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Chaperone protein (Heat shock protein 70) of Agrobacterium radiobacter str. K84

 Names & Lineage - Classification - Sequence - Domains - Ontologies - Refernces - X-Ref - External Links -Record Info 

NAMES AND LINEAGE

Protein names

Name

Chaperone protein (Heat shock protein 70)

Synonymous Names

B9JGW3_AGRRK, HSP70, Heat shock 70 kDa protein, Heat shock protein 70, DnaK

Gene names

Gene Name

dnaK

Gene Locus Tag

Arad_0212

Gene Identifier

7371034

Taxon Information

Organism

Agrobacterium radiobacter str. K84

Organism ID

311403 [NCBI] [UNIPROT]

Lineage

Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium radiobacter K84

CLASSIFICATION

Protein Classification

Protein Family

Belongs to Hsp70 Protein family

SEQUENCE INFORMATION

Sequence
MPDRGSDSLLQGENDMAKVIGIDLGTTNSCVAVMDGKDAKVIENAEGARTTPSMVAFTEDGERLVGQPAK RQAVTNPTNTLFAVKRLIGRRYEDPTVEKDKHLVPFNIVKGDNGDAWVEAHGKGYSPAQVSAMILQKMKE TAEAYLGEKVEKAVITVPAYFNDAQRQATKDAGRIAGLEVLRIINEPTAAALAYGLDKKDGKTIAVYDLG GGTFDISILEIGDGVFEVKSTNGDTFLGGEDFDMRLVEYLVAEFKKDNGIDLKGDKLALQRLKEAAEKAK IELSSAQQTEINLPFITADATGPKHLTLKLTRAKLESLVDDLVQRTIAPCKAALKDAGVTAAEIDEVVLV GGMSRMPKVQEVVKQLFGKEPHKGVNPDEVVALGAAIQAGVLQGDVKDVLLLDVTPLSLGIETLGGVFTR LIERNTTIPTKKSQTFSTADDNQSAVTIRVSQGEREMAADNKLLGQFDLVGLPPAPRGMPQIEVTFDIDA NGIVQVSAKDKGTGKEQQIRIQASGGLSDADIEKMVKDAESHAAEDKKRREGVEAKNQAESLIHSSEKSL KDFGDKVTEADRNAISEAIAALKTATEASEPDAEDIKAKTQTLMEVSMKLGQAIYEAQQSEAPSADASAG GHHDDVVDADYEEIKDEDDRKRSA

FASTA Format Composition Secondary Structure

Nucleotide
 ATGCCTGACAGGGGTTCCGATAGCTTGCTTCAAGGAGAGAATGACATGGCAAAAGTAATTGGTATCGACCTTGGAACGACAAATTCCTG
CGTCGCCGTCATGGACGGTAAAGACGCGAAAGTCATCGAGAATGCCGAAGGCGCCCGCACTACCCCCTCAATGGTAGCCTTCACTGAAGA
CGGCGAACGTCTCGTCGGCCAGCCGGCCAAGCGCCAGGCGGTCACCAACCCCACCAATACCCTCTTCGCTGTCAAGCGCCTTATCGGCCG
CCGCTACGAAGATCCGACCGTTGAAAAAGACAAGCACCTTGTTCCTTTCAATATCGTCAAGGGCGACAATGGCGACGCCTGGGTCGAAGC
CCACGGCAAGGGCTATTCGCCCGCGCAGGTTTCCGCAATGATCCTTCAGAAGATGAAGGAAACCGCAGAAGCCTATCTCGGTGAAAAGGT
CGAAAAGGCAGTCATCACCGTTCCGGCCTACTTCAACGACGCGCAGCGCCAGGCAACCAAGGATGCCGGCCGCATCGCCGGTCTTGAAGT
CCTGCGTATCATCAACGAGCCGACCGCTGCGGCCCTCGCCTACGGCCTCGACAAGAAGGACGGCAAGACCATCGCCGTTTACGACCTTGG
CGGCGGCACCTTCGATATCTCGATCCTGGAAATCGGCGACGGCGTCTTCGAAGTGAAGTCGACCAACGGCGATACCTTCCTTGGCGGTGA
AGACTTCGACATGCGTCTCGTCGAATATCTCGTTGCCGAGTTCAAGAAGGACAACGGCATCGACCTCAAGGGCGACAAGCTTGCTCTGCA
GCGCCTCAAGGAAGCTGCCGAAAAGGCGAAGATCGAACTGTCCTCCGCGCAGCAGACCGAAATCAACCTGCCCTTCATCACGGCAGACGC
CACCGGCCCGAAGCACCTGACGCTGAAGCTGACTCGCGCCAAGCTGGAAAGCCTGGTCGACGACCTCGTGCAGCGCACCATCGCGCCGTG
CAAGGCCGCCCTCAAGGATGCCGGCGTTACGGCTGCCGAGATCGACGAAGTCGTTCTCGTCGGCGGCATGAGCCGCATGCCGAAGGTACA
GGAAGTCGTCAAGCAGCTGTTCGGCAAAGAGCCGCACAAGGGCGTCAACCCGGATGAAGTCGTCGCTCTCGGCGCCGCCATCCAGGCCGG
CGTTCTGCAGGGCGACGTCAAGGACGTCCTGCTCCTCGACGTGACCCCGCTGTCTCTCGGCATCGAAACGCTGGGTGGCGTCTTCACCCG
TCTGATCGAGCGCAACACCACGATCCCGACGAAGAAGTCGCAGACCTTCTCGACCGCCGACGACAACCAGTCGGCCGTGACCATCCGCGT
CTCGCAGGGCGAGCGCGAAATGGCCGCCGACAACAAGCTGCTCGGCCAGTTCGACCTCGTCGGCCTGCCGCCGGCACCGCGCGGCATGCC
GCAGATCGAAGTCACCTTCGACATCGACGCCAACGGCATCGTCCAGGTTTCGGCCAAGGACAAGGGCACCGGCAAGGAACAGCAGATTCG
CATCCAGGCTTCGGGCGGTCTCTCCGACGCCGACATCGAGAAGATGGTCAAGGATGCCGAATCGCATGCTGCCGAAGACAAGAAGCGCCG
CGAAGGCGTGGAAGCCAAGAACCAGGCCGAAAGCCTGATTCATTCCAGCGAGAAATCGCTGAAGGACTTTGGCGACAAGGTCACCGAGGC
CGATCGCAACGCGATCTCCGAGGCGATTGCAGCGCTGAAGACGGCAACCGAAGCATCCGAGCCGGACGCTGAAGACATCAAGGCCAAGAC
CCAGACGCTCATGGAAGTGTCCATGAAGCTCGGCCAGGCTATCTATGAGGCCCAGCAGTCGGAAGCTCCTTCCGCTGATGCCTCGGCAGG
CGGCCACCACGACGACGTCGTCGATGCCGACTACGAGGAAATCAAGGACGAGGACGACCGCAAGCGGTCTGCATAA 

Download Fasta Sequence

Composition
NucleotideCountPercentage
Adenine46624 %
Guanine56629 %
Thyamine30616 %
Cytosine62732 %
A+T77240 %
G+C119361 %

Total Bases :   1965 bases

Microsatellites
SequencePosition LengthRepeats
GAGAGA3423
GGCGGCGGC62733
TCTCTC122123
CGCGCG142623
TCTCTC154723
ACGACGACG189733

Microsatellite Map

ATGCCTGACAGGGGTTCCGATAGCTTGCTTCAAGGAGAGAATGACATGGCAAAAGTAATTGGTATCGACCTTGGAACGACAAATTCCTGC
GTCGCCGTCATGGACGGTAAAGACGCGAAAGTCATCGAGAATGCCGAAGGCGCCCGCACTACCCCCTCAATGGTAGCCTTCACTGAAGAC
GGCGAACGTCTCGTCGGCCAGCCGGCCAAGCGCCAGGCGGTCACCAACCCCACCAATACCCTCTTCGCTGTCAAGCGCCTTATCGGCCGC
CGCTACGAAGATCCGACCGTTGAAAAAGACAAGCACCTTGTTCCTTTCAATATCGTCAAGGGCGACAATGGCGACGCCTGGGTCGAAGCC
CACGGCAAGGGCTATTCGCCCGCGCAGGTTTCCGCAATGATCCTTCAGAAGATGAAGGAAACCGCAGAAGCCTATCTCGGTGAAAAGGTC
GAAAAGGCAGTCATCACCGTTCCGGCCTACTTCAACGACGCGCAGCGCCAGGCAACCAAGGATGCCGGCCGCATCGCCGGTCTTGAAGTC
CTGCGTATCATCAACGAGCCGACCGCTGCGGCCCTCGCCTACGGCCTCGACAAGAAGGACGGCAAGACCATCGCCGTTTACGACCTTGGC
GGCGGCACCTTCGATATCTCGATCCTGGAAATCGGCGACGGCGTCTTCGAAGTGAAGTCGACCAACGGCGATACCTTCCTTGGCGGTGAA
GACTTCGACATGCGTCTCGTCGAATATCTCGTTGCCGAGTTCAAGAAGGACAACGGCATCGACCTCAAGGGCGACAAGCTTGCTCTGCAG
CGCCTCAAGGAAGCTGCCGAAAAGGCGAAGATCGAACTGTCCTCCGCGCAGCAGACCGAAATCAACCTGCCCTTCATCACGGCAGACGCC
ACCGGCCCGAAGCACCTGACGCTGAAGCTGACTCGCGCCAAGCTGGAAAGCCTGGTCGACGACCTCGTGCAGCGCACCATCGCGCCGTGC
AAGGCCGCCCTCAAGGATGCCGGCGTTACGGCTGCCGAGATCGACGAAGTCGTTCTCGTCGGCGGCATGAGCCGCATGCCGAAGGTACAG
GAAGTCGTCAAGCAGCTGTTCGGCAAAGAGCCGCACAAGGGCGTCAACCCGGATGAAGTCGTCGCTCTCGGCGCCGCCATCCAGGCCGGC
GTTCTGCAGGGCGACGTCAAGGACGTCCTGCTCCTCGACGTGACCCCGCTGTCTCTCGGCATCGAAACGCTGGGTGGCGTCTTCACCCGT
CTGATCGAGCGCAACACCACGATCCCGACGAAGAAGTCGCAGACCTTCTCGACCGCCGACGACAACCAGTCGGCCGTGACCATCCGCGTC
TCGCAGGGCGAGCGCGAAATGGCCGCCGACAACAAGCTGCTCGGCCAGTTCGACCTCGTCGGCCTGCCGCCGGCACCGCGCGGCATGCCG
CAGATCGAAGTCACCTTCGACATCGACGCCAACGGCATCGTCCAGGTTTCGGCCAAGGACAAGGGCACCGGCAAGGAACAGCAGATTCGC
ATCCAGGCTTCGGGCGGTCTCTCCGACGCCGACATCGAGAAGATGGTCAAGGATGCCGAATCGCATGCTGCCGAAGACAAGAAGCGCCGC
GAAGGCGTGGAAGCCAAGAACCAGGCCGAAAGCCTGATTCATTCCAGCGAGAAATCGCTGAAGGACTTTGGCGACAAGGTCACCGAGGCC
GATCGCAACGCGATCTCCGAGGCGATTGCAGCGCTGAAGACGGCAACCGAAGCATCCGAGCCGGACGCTGAAGACATCAAGGCCAAGACC
CAGACGCTCATGGAAGTGTCCATGAAGCTCGGCCAGGCTATCTATGAGGCCCAGCAGTCGGAAGCTCCTTCCGCTGATGCCTCGGCAGGC
GGCCACCACGACGACGTCGTCGATGCCGACTACGAGGAAATCAAGGACGAGGACGACCGCAAGCGGTCTGCATAA

Gene Information
Molecule Type genomic DNA
Bases 1965 Bases
Molecular Weight606627.82 Da
Coding Sequence complement(CP000628.1:185479..187443)
NCBI ReferenceACM24959
Notes

DOMAINS AND MOTIFS   Hide

Domains
Domain Position Length Description Feature Identifier
Nucleotide Binding Domain 19 to 397 379 N-terminal nucleotide/ATP binding domain PF00012
Linker 398 to 404 7 Linker region Manually identified
Substrate Binding Domain 405 to 616 212 C-terminal substrate/peptide binding domain PF00012
Coiled Coil 262 to 289 28 Coiled coil region Manually identified

Graphical View

ONTOLOGIES   Show


LITERATURE REFERENCES   Show


ACCESSIONS   Show


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Protein Card Information

Record Information

Entry Name

HSP70_AGRA1

Accession Number

HSP70_0021

Added on

2012-02-02

Updated On

2014-01-20