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chaperonin GroES. of Acaryochloris marina str. MBIC 11017

 Names & Lineage - Classification - Sequence - Domains - Ontologies - Refernces - X-Ref - External Links -Record Info 

NAMES AND LINEAGE

Protein names

Name

chaperonin GroES.

Synonymous Names

B0CEZ2_ACAM1, Cpn10, 10 kDa protein.

Gene names

Gene Name

groES

Gene Locus Tag

AM1_4412

Gene Identifier

5683214

Taxon Information

Organism

Acaryochloris marina str. MBIC 11017

Organism ID

329726 [NCBI] [UNIPROT]

Lineage

Bacteria; Cyanobacteria; Acaryochloris marina MBIC11017

CLASSIFICATION

Protein Classification

Protein Family

Belongs to Hsp60 Protein family

Protein Type

Group I Chaperonin
(Bacterial Homolog)

SEQUENCE INFORMATION

Sequence
MAAISLSVSTVKPLGDRVFVKVSAAEEQTAGGIILPDAAKEKPQVGEITAVGPGKRGDDGSRQALDVKEG DKVLYSKYAGTDVKLGGEEYVLLSEKDILAIVN

FASTA Format Composition Secondary Structure

Nucleotide
 ATGGCAGCTATTTCCTTAAGCGTCTCTACAGTCAAGCCTTTAGGTGATCGCGTATTCGTCAAAGTCAGTGCTGCAGAAGAGCAAACTGC
AGGTGGCATTATTTTGCCCGATGCGGCCAAAGAGAAGCCTCAGGTGGGTGAAATTACTGCTGTTGGCCCAGGTAAGCGGGGCGACGATGG
ATCTCGCCAAGCCTTAGATGTCAAAGAAGGCGACAAAGTTCTGTATTCCAAGTACGCCGGTACAGATGTCAAGCTCGGCGGTGAAGAGTA
TGTACTGCTTTCTGAAAAAGATATTTTGGCGATCGTCAACTAG 

Download Fasta Sequence

Composition
NucleotideCountPercentage
Adenine8227 %
Guanine8728 %
Thyamine7725 %
Cytosine6622 %
A+T15951 %
G+C15350 %

Total Bases :   312 bases

Microsatellites
SequencePosition LengthRepeats

Microsatellite Map

ATGGCAGCTATTTCCTTAAGCGTCTCTACAGTCAAGCCTTTAGGTGATCGCGTATTCGTCAAAGTCAGTGCTGCAGAAGAGCAAACTGCA
GGTGGCATTATTTTGCCCGATGCGGCCAAAGAGAAGCCTCAGGTGGGTGAAATTACTGCTGTTGGCCCAGGTAAGCGGGGCGACGATGGA
TCTCGCCAAGCCTTAGATGTCAAAGAAGGCGACAAAGTTCTGTATTCCAAGTACGCCGGTACAGATGTCAAGCTCGGCGGTGAAGAGTAT
GTACTGCTTTCTGAAAAAGATATTTTGGCGATCGTCAACTAG

Gene Information
Molecule Type genomic DNA
Bases 312 Bases
Molecular Weight96771.81 Da
Coding Sequence complement(CP000828.1:4438914..4439225)
NCBI ReferenceABW29389
Notes

DOMAINS AND MOTIFS   Hide

Domains
Domain Position Length Description Feature Identifier
Cpn10 10 to 102 93 Chaperonin 10 Kd subunit (cpn10 or GroES) PF00166
Cd00320

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Protein Card Information

Record Information

Entry Name

GroES_ACMA1

Accession Number

HSP60_0004

Added on

2012-02-02

Updated On

2014-01-20