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Chaperonin GroEL. of Acaryochloris marina str. MBIC 11017

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NAMES AND LINEAGE

Protein names

Name

Chaperonin GroEL.

Synonymous Names

CH601_ACAM1, Hsp60, Protein Cpn60 1, groEL protein 1.

Gene names

Gene Name

groEL

Gene Locus Tag

AM1_3214

Gene Identifier

5682022

Taxon Information

Organism

Acaryochloris marina str. MBIC 11017

Organism ID

329726 [NCBI] [UNIPROT]

Lineage

Bacteria; Cyanobacteria; Acaryochloris marina MBIC11017

CLASSIFICATION

Protein Classification

Protein Family

Belongs to Hsp60 Protein family

Protein Type

Group I Chaperonin
(Bacterial Homolog)

SEQUENCE INFORMATION

Sequence
MAKHVVFDEESRRALERGVNSLADAVRITLGPKGRNVVLEKKFGAPQIINDGVTIAKEVELEDPLENAGA QLMREVASKTNDVAGDGTTTATVLAQALIREGLKNVAAGANPVALRKGIDKTIDALVKEIEAKSKPVAGD AIAQVATISAGNDTEVGQMIAQAMDKVGKDGVITVEESKSLATEMEIVEGMQIDRGYISPYFVTDAERMV AEIENARLLIVNKKISSLQDLVGILEQVARAGQPLLIIAEDLEGEALATLVVNKLRGVLNVVAIKAPGFG ERRQAMLQDIAVLTGGQVISEDVGLTLDKVDLEMLGTARKVTISKDNTTIVSEAANAGDVGKRVEQLRRQ LDETDSEYDKEKLQERIAKLAGGVAVIKVGAATETELKDRKLRIEDALNATKAAVAEGIVPGGGTTLIHL TKTIESVKAQLKDEEKVGADLVGIALEAPLTQIADNAGKEGAVVVEKVRDADFSYGYNAMTDTYEDMIAA GVVDPAKVVRSGLQNAGSIAGMVLTTEALVVDKPEPAGAAAPDMGGMGGMGGMGGMGGMGGMGGMGMM

FASTA Format Composition Secondary Structure

Nucleotide
 ATGGCCAAACATGTAGTATTTGATGAAGAATCGCGTCGCGCTCTTGAGCGTGGTGTGAATTCTCTGGCAGATGCCGTACGAATTACATT
GGGACCTAAAGGTCGCAATGTGGTTCTGGAAAAGAAATTCGGAGCACCCCAAATTATTAATGATGGGGTGACCATTGCGAAGGAAGTTGA
GCTGGAAGATCCGTTGGAGAATGCGGGTGCACAGCTGATGCGTGAAGTCGCTTCCAAAACCAATGATGTCGCGGGTGATGGTACCACTAC
CGCTACAGTTCTGGCCCAAGCTTTGATTCGCGAAGGTTTGAAGAATGTGGCTGCTGGTGCTAACCCCGTGGCCCTTCGCAAAGGGATTGA
TAAGACGATTGATGCCTTAGTGAAAGAGATCGAAGCCAAGTCGAAGCCCGTTGCCGGAGATGCGATCGCACAAGTGGCAACCATCTCTGC
CGGGAACGATACCGAAGTCGGTCAAATGATTGCCCAAGCCATGGATAAGGTGGGCAAAGATGGCGTCATTACCGTAGAAGAATCCAAGTC
CCTCGCCACCGAAATGGAAATTGTGGAAGGGATGCAAATCGATCGGGGTTATATCTCTCCTTACTTTGTGACTGATGCAGAACGCATGGT
TGCTGAGATCGAAAATGCCCGCTTGCTGATCGTTAACAAGAAAATCAGTTCTCTTCAAGATCTCGTCGGTATCCTGGAGCAAGTTGCCCG
TGCTGGACAGCCTCTCCTAATTATTGCTGAAGATCTAGAAGGAGAAGCCCTAGCCACGTTGGTGGTGAACAAGCTGCGGGGTGTCCTTAA
TGTTGTGGCTATCAAGGCTCCTGGTTTTGGTGAGCGCCGCCAAGCCATGCTTCAAGACATTGCCGTCCTCACCGGTGGACAGGTCATTTC
TGAAGATGTGGGTTTAACCCTCGACAAAGTTGATTTAGAGATGTTGGGGACGGCTCGTAAGGTCACCATCAGCAAAGACAACACCACGAT
TGTGTCGGAAGCAGCCAATGCAGGTGATGTCGGCAAGCGAGTAGAGCAGCTCCGTCGCCAGTTGGATGAAACCGATTCTGAGTACGACAA
AGAAAAGCTGCAAGAGCGGATTGCTAAGCTGGCAGGGGGCGTTGCTGTCATCAAAGTAGGTGCTGCAACCGAAACCGAGCTTAAGGATCG
TAAATTGCGCATCGAAGATGCGCTCAATGCAACGAAAGCAGCCGTAGCTGAAGGGATCGTTCCTGGCGGTGGCACCACCCTGATTCATCT
CACCAAAACCATTGAGAGTGTTAAAGCTCAATTGAAAGATGAAGAAAAAGTCGGTGCAGATCTCGTGGGTATTGCGTTAGAAGCGCCTCT
CACTCAAATTGCAGACAATGCTGGTAAAGAAGGCGCTGTCGTTGTAGAGAAAGTCCGTGATGCGGACTTCAGCTATGGCTATAACGCCAT
GACTGACACCTACGAAGATATGATTGCTGCCGGAGTCGTTGATCCTGCAAAGGTGGTTCGTTCGGGCCTCCAAAATGCGGGGTCGATTGC
TGGCATGGTGCTCACCACTGAAGCCTTAGTAGTGGATAAGCCTGAACCTGCAGGTGCTGCTGCGCCCGATATGGGCGGCATGGGCGGCAT
GGGTGGCATGGGCGGCATGGGCGGCATGGGTGGCATGGGCGGCATGGGCATGATGTAA 

Download Fasta Sequence

Composition
NucleotideCountPercentage
Adenine43126 %
Guanine49730 %
Thyamine38123 %
Cytosine36822 %
A+T81249 %
G+C86552 %

Total Bases :   1677 bases

Microsatellites
SequencePosition LengthRepeats
TCTCTC59223
TGCTGCTGC158333

Microsatellite Map

ATGGCCAAACATGTAGTATTTGATGAAGAATCGCGTCGCGCTCTTGAGCGTGGTGTGAATTCTCTGGCAGATGCCGTACGAATTACATTG
GGACCTAAAGGTCGCAATGTGGTTCTGGAAAAGAAATTCGGAGCACCCCAAATTATTAATGATGGGGTGACCATTGCGAAGGAAGTTGAG
CTGGAAGATCCGTTGGAGAATGCGGGTGCACAGCTGATGCGTGAAGTCGCTTCCAAAACCAATGATGTCGCGGGTGATGGTACCACTACC
GCTACAGTTCTGGCCCAAGCTTTGATTCGCGAAGGTTTGAAGAATGTGGCTGCTGGTGCTAACCCCGTGGCCCTTCGCAAAGGGATTGAT
AAGACGATTGATGCCTTAGTGAAAGAGATCGAAGCCAAGTCGAAGCCCGTTGCCGGAGATGCGATCGCACAAGTGGCAACCATCTCTGCC
GGGAACGATACCGAAGTCGGTCAAATGATTGCCCAAGCCATGGATAAGGTGGGCAAAGATGGCGTCATTACCGTAGAAGAATCCAAGTCC
CTCGCCACCGAAATGGAAATTGTGGAAGGGATGCAAATCGATCGGGGTTATATCTCTCCTTACTTTGTGACTGATGCAGAACGCATGGTT
GCTGAGATCGAAAATGCCCGCTTGCTGATCGTTAACAAGAAAATCAGTTCTCTTCAAGATCTCGTCGGTATCCTGGAGCAAGTTGCCCGT
GCTGGACAGCCTCTCCTAATTATTGCTGAAGATCTAGAAGGAGAAGCCCTAGCCACGTTGGTGGTGAACAAGCTGCGGGGTGTCCTTAAT
GTTGTGGCTATCAAGGCTCCTGGTTTTGGTGAGCGCCGCCAAGCCATGCTTCAAGACATTGCCGTCCTCACCGGTGGACAGGTCATTTCT
GAAGATGTGGGTTTAACCCTCGACAAAGTTGATTTAGAGATGTTGGGGACGGCTCGTAAGGTCACCATCAGCAAAGACAACACCACGATT
GTGTCGGAAGCAGCCAATGCAGGTGATGTCGGCAAGCGAGTAGAGCAGCTCCGTCGCCAGTTGGATGAAACCGATTCTGAGTACGACAAA
GAAAAGCTGCAAGAGCGGATTGCTAAGCTGGCAGGGGGCGTTGCTGTCATCAAAGTAGGTGCTGCAACCGAAACCGAGCTTAAGGATCGT
AAATTGCGCATCGAAGATGCGCTCAATGCAACGAAAGCAGCCGTAGCTGAAGGGATCGTTCCTGGCGGTGGCACCACCCTGATTCATCTC
ACCAAAACCATTGAGAGTGTTAAAGCTCAATTGAAAGATGAAGAAAAAGTCGGTGCAGATCTCGTGGGTATTGCGTTAGAAGCGCCTCTC
ACTCAAATTGCAGACAATGCTGGTAAAGAAGGCGCTGTCGTTGTAGAGAAAGTCCGTGATGCGGACTTCAGCTATGGCTATAACGCCATG
ACTGACACCTACGAAGATATGATTGCTGCCGGAGTCGTTGATCCTGCAAAGGTGGTTCGTTCGGGCCTCCAAAATGCGGGGTCGATTGCT
GGCATGGTGCTCACCACTGAAGCCTTAGTAGTGGATAAGCCTGAACCTGCAGGTGCTGCTGCGCCCGATATGGGCGGCATGGGCGGCATG
GGTGGCATGGGCGGCATGGGCGGCATGGGTGGCATGGGCGGCATGGGCATGATGTAA

Gene Information
Molecule Type genomic DNA
Bases 1677 Bases
Molecular Weight520867.36 Da
Coding Sequence CP000828.1:3252289..3253965
NCBI ReferenceABW28210
Notes

DOMAINS AND MOTIFS   Hide

Domains
Domain Position Length Description Feature Identifier
GroEL 3 to 522 520 GroEL/cpn60 chaperonin domain PF00118
Cd03344
Coiled coil 338 to 366 29 Coiled coil region Manually identified

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Protein Card Information

Record Information

Entry Name

GroEL_ACMA1

Accession Number

HSP60_0001

Added on

2012-02-02

Updated On

2014-01-20