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hypothetical protein AM1_3877 of Acaryochloris marina str. MBIC 11017

 Names & Lineage - Classification - Sequence - Domains - Ontologies - Refernces - X-Ref - External Links -Record Info 

NAMES AND LINEAGE

Protein names

Name

hypothetical protein AM1_3877

Synonymous Names

B0C722_ACAM1, Hsp40/J-protein, Putative uncharacterized protein

Taxon Information

Organism

Acaryochloris marina str. MBIC 11017

Organism ID

329726 [NCBI] [UNIPROT]

Lineage

Bacteria; Cyanobacteria; Acaryochloris marina MBIC11017

CLASSIFICATION

Protein Classification

Protein Family

Belongs to Hsp40 Protein family

Protein Type

Type III J-Protein

SEQUENCE INFORMATION

Sequence
MHVGEAYLQTLSLNKNATFDEVREAYQDLVMVWHPDRFVHNPRLYKKAEAKLKEFNQAYAYLKAHQARPC PTPHKRARTAPPSPPTSKTLKKRRGMACPWLTYTDATYILNHYSFEAIASKTVGHRTFQSGPFVLDTCEQ PAEVLLSVPCDSVHAFDRILLSIPCKSQGHFWQEEAQQLMNLLHTQGN

FASTA Format Composition Secondary Structure

Nucleotide
 ATGCATGTTGGCGAGGCATATCTGCAAACCTTATCCCTCAATAAAAACGCGACCTTTGATGAAGTTCGGGAAGCCTATCAGGATTTAGT
GATGGTGTGGCATCCTGATCGATTTGTGCATAATCCTCGCCTATATAAAAAAGCAGAAGCCAAACTCAAAGAATTTAATCAAGCCTACGC
CTACTTAAAAGCCCATCAAGCTCGGCCTTGCCCAACGCCTCACAAACGAGCCAGGACTGCTCCCCCATCCCCCCCGACATCCAAAACCCT
AAAAAAACGTCGGGGTATGGCTTGTCCTTGGTTGACTTATACTGATGCCACTTACATTCTGAATCACTACTCCTTTGAGGCGATAGCATC
CAAAACGGTTGGGCACCGAACCTTCCAGAGTGGTCCTTTTGTTTTAGATACCTGCGAACAGCCTGCAGAGGTGCTTCTTTCCGTTCCCTG
TGATTCTGTCCATGCCTTTGATCGGATTTTGCTGTCTATTCCCTGTAAATCTCAAGGTCACTTTTGGCAGGAAGAAGCGCAACAGCTGAT
GAATCTGCTACACACTCAAGGAAACTAG 

Download Fasta Sequence

Composition
NucleotideCountPercentage
Adenine15227 %
Guanine11521 %
Thyamine14827 %
Cytosine15227 %
A+T30053 %
G+C26748 %

Total Bases :   567 bases

Microsatellites
SequencePosition LengthRepeats
TATATA13023
CCCCCC24723
AAAAAA26923
ACACAC54823

Microsatellite Map

ATGCATGTTGGCGAGGCATATCTGCAAACCTTATCCCTCAATAAAAACGCGACCTTTGATGAAGTTCGGGAAGCCTATCAGGATTTAGTG
ATGGTGTGGCATCCTGATCGATTTGTGCATAATCCTCGCCTATATAAAAAAGCAGAAGCCAAACTCAAAGAATTTAATCAAGCCTACGCC
TACTTAAAAGCCCATCAAGCTCGGCCTTGCCCAACGCCTCACAAACGAGCCAGGACTGCTCCCCCATCCCCCCCGACATCCAAAACCCTA
AAAAAACGTCGGGGTATGGCTTGTCCTTGGTTGACTTATACTGATGCCACTTACATTCTGAATCACTACTCCTTTGAGGCGATAGCATCC
AAAACGGTTGGGCACCGAACCTTCCAGAGTGGTCCTTTTGTTTTAGATACCTGCGAACAGCCTGCAGAGGTGCTTCTTTCCGTTCCCTGT
GATTCTGTCCATGCCTTTGATCGGATTTTGCTGTCTATTCCCTGTAAATCTCAAGGTCACTTTTGGCAGGAAGAAGCGCAACAGCTGATG
AATCTGCTACACACTCAAGGAAACTAG

Gene Information
Molecule Type genomic DNA
Bases 567 Bases
Molecular Weight174382.07 Da
Coding Sequence CP000828.1:3928607..3929173
NCBI ReferenceABW28861
Notes

DOMAINS AND MOTIFS   Hide

Domains
Domain Position Length Description Feature Identifier
J-domain 6 to 69 64 N-terminal DnaJ domain PF00226

Graphical View

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Protein Card Information

Record Information

Entry Name

HSP40_ACMA11

Accession Number

HSP40_0011

Added on

2012-02-02

Updated On

2014-01-20