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DnaJ-like protein of Acaryochloris marina str. MBIC 11017

 Names & Lineage - Classification - Sequence - Domains - Ontologies - Refernces - X-Ref - External Links -Record Info 

NAMES AND LINEAGE

Protein names

Name

DnaJ-like protein

Synonymous Names

B0CAY3_ACAM1, Hsp40/J-protein

Taxon Information

Organism

Acaryochloris marina str. MBIC 11017

Organism ID

329726 [NCBI] [UNIPROT]

Lineage

Bacteria; Cyanobacteria; Acaryochloris marina MBIC11017

CLASSIFICATION

Protein Classification

Protein Family

Belongs to Hsp40 Protein family

Protein Type

Type III J-Protein

SEQUENCE INFORMATION

Sequence
MSMDSNFYQLLDLSPGASSDEIHDAYRRKSKVYHPDTTALPKETAIQKFQQLNDAYRVLSSPELRKSYDY RLGVSPAKYTSVQKVRSSDNPLASSQVQIQERPLSSGELVALLILCITFLGCLILAVVLGFARGEMMFVG LATLYLI

FASTA Format Composition Secondary Structure

Nucleotide
 ATGTCGATGGATTCAAATTTCTACCAGTTGCTAGATCTTTCTCCTGGAGCTTCTAGTGATGAGATCCATGATGCTTATCGAAGAAAGAG
CAAGGTTTACCATCCTGACACAACGGCTTTACCCAAGGAAACTGCGATCCAAAAATTTCAACAACTTAATGATGCATATAGAGTTTTGAG
TAGTCCTGAACTAAGAAAATCATATGATTATCGTTTAGGTGTTTCGCCTGCCAAATATACCTCCGTGCAGAAGGTGCGCAGTTCAGATAA
TCCATTGGCATCTTCACAGGTTCAAATCCAAGAACGCCCTTTGTCTTCTGGCGAGCTTGTTGCATTATTAATTTTGTGTATAACCTTCTT
AGGGTGTTTAATCTTGGCTGTGGTGTTGGGTTTTGCCCGTGGAGAAATGATGTTTGTAGGACTTGCTACTCTTTACCTGATATGA 

Download Fasta Sequence

Composition
NucleotideCountPercentage
Adenine11727 %
Guanine9522 %
Thyamine14633 %
Cytosine8620 %
A+T26360 %
G+C18141 %

Total Bases :   444 bases

Microsatellites
SequencePosition LengthRepeats

Microsatellite Map

ATGTCGATGGATTCAAATTTCTACCAGTTGCTAGATCTTTCTCCTGGAGCTTCTAGTGATGAGATCCATGATGCTTATCGAAGAAAGAGC
AAGGTTTACCATCCTGACACAACGGCTTTACCCAAGGAAACTGCGATCCAAAAATTTCAACAACTTAATGATGCATATAGAGTTTTGAGT
AGTCCTGAACTAAGAAAATCATATGATTATCGTTTAGGTGTTTCGCCTGCCAAATATACCTCCGTGCAGAAGGTGCGCAGTTCAGATAAT
CCATTGGCATCTTCACAGGTTCAAATCCAAGAACGCCCTTTGTCTTCTGGCGAGCTTGTTGCATTATTAATTTTGTGTATAACCTTCTTA
GGGTGTTTAATCTTGGCTGTGGTGTTGGGTTTTGCCCGTGGAGAAATGATGTTTGTAGGACTTGCTACTCTTTACCTGATATGA

Gene Information
Molecule Type genomic DNA
Bases 444 Bases
Molecular Weight137141.24 Da
Coding Sequence complement(CP000828.1:389862..390305)
NCBI ReferenceABW25473
Notes

DOMAINS AND MOTIFS   Hide

Domains
Domain Position Length Description Feature Identifier
J-domain 6 to 69 64 N-terminal DnaJ domain PF00226
TMhelix 109 to 131 23 Transmembrane helix region Manually identified

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Protein Card Information

Record Information

Entry Name

HSP40_ACMA9

Accession Number

HSP40_0009

Added on

2012-02-02

Updated On

2014-01-20